IGVFFI5963ASJN

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS6850KERY(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP007_G7_P056_L008_I2

md5sum

8274466222af0f821b9e1c52bede6576

Content MD5sum

a69832f0632bdd609a10ca177ecdfa14

File Size

258 MB

Submitted File Name

Multiome_RNA_RP007_G7_L007_P056_S94_L008_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JHVLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

46693548

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM4219SNVI

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 92 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (male, 81 years) cerebellar cortex tissue; ... and 10 more samples