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IGVFFI5944QMGJ

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS6898BFIV(single-nucleus ATAC-seq (10x multiome))
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_ATAC_X021_G6_P021_L001_R1
md5sum
303a8d38868df491a18fccf09ea56cf9
Content MD5sum
e3e0abc3a85cfb05f454affc594bddf7
File Size
8.7 GB
Submitted File Name
Multiome_ATAC_X021_G6_L006_P021_S4_L001_R1_001.fastq.gz
Checkfiles Version
v20

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Flowcell ID
HV7TNDSX5
Lane
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
280374740

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male, 90 or above years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 70 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 10 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Ryan Corces, Gladstone Institute UCSF