Home
Home
Search (⌘K or ⌃K)
Data
Resources / Standards
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI5916QFVO
IGVFFI5916QFVO
released
validated
Json view
File Set
IGVFDS6641LPPX
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 987
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_987_R1
md5sum
f0fb3f09f0c3eeb8be4cf8b4b5edb430
Content MD5sum
f7c27d7154c248a752f3369f9926169b
File Size
2.4 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-958_L2_SS-PKR-183_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
987
Flowcell ID
22773CLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
44026043
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6078OOPT
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 183)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI9506ZZHO
yaml
seqspec
seqspec of IGVFFI5916QFVO, IGVFFI0779QBBP, IGVFFI3315VCRD
Jason Buenrostro, Broad
1.3 KB
validated