Home

IGVFFI5885ETVL

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS4257XYUS(single-nucleus ATAC-seq (10x multiome))
Summary
R1 reads from sequencing run 537
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX8-SC1_snATAC_S1_R1
md5sum
e08765115295052d94ea0df86558dbcb
Content MD5sum
974bf7443112c0cb58060bb47c6e22d9
File Size
5.6 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX8-SC1/BH2VM7DSX3/XHLT1-POOL-XX8-SC1-ATAC_S13_L001_R1_001.fastq.gz
Checkfiles Version
v17

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
537
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
183707210

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female, 27.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 48.0 years) peripheral blood mononuclear cell; ... and 17 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Jimmie Ye, UCSF