Home

IGVFFI5882ANGC

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS3500WEWQ(single-nucleus ATAC-seq (10x multiome))
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_ATAC_RP003_G10_P051_L006_R1
md5sum
9e2cf9bd99b646d78ce5e9486d1ab0e8
Content MD5sum
568760756deac0ebbfc52049ec612cd4
File Size
1.7 GB
Submitted File Name
Multiome_ATAC_RP003_G10_L010_P051_S38_L006_R1_001.fastq.gz
Checkfiles Version
v20
Attribution
Ryan Corces, Gladstone Institute UCSF

Sequencing Details

Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
223JL2LT3
Lane
6
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
50
Read Count
56026275

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male, 81 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 86 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples