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IGVFFI5853DWBK

released
validated
File Set
IGVFDS2439BCVO(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 2472
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2472_R1
buenrostro-bernstein:SS-LS_2472_R1
md5sum
7d10ef394dbaa22b46ba398828624598
Content MD5sum
3156b32d9e5db399b9cbbdc1c021b69a
File Size
269 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-44_L3_SS-PKR-4_SS-V2-PLATE2-1st-THIRD_R1.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2472
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
13384104

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 4), male, Homo sapiens (49 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad