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INDEXED
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SequenceFile
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IGVFFI5834LJVS
IGVFFI5834LJVS
released
validated
Json view
File Set
IGVFDS1670HEIT
(single-cell RNA sequencing assay (SHARE-seq))
Summary
I1 reads from sequencing run 3
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:surya-DSS15-prim-20K-RNA.barcode.fastq.gz
md5sum
41ac9be35d17176641277afc933bf193
Content MD5sum
e7b8528aac85dd6588c5c0b066990287
File Size
2.6 GB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/submit-fqs/barcode-file/DSS15-prim-20K-RNA.barcode.fastq.gz
Checkfiles Version
v19
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
I1
Average Read Length
32
Read Count
120775897
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4720VFLQ
PrimaryCell
colon
Mus musculus C57BL/6J colon cell
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2930VAIP
yaml
seqspec
seqspec of IGVFFI5899DGGJ, IGVFFI8352YZXM, IGVFFI5834LJVS
Jason Buenrostro, Broad
1.2 KB
validated