IGVFFI5832WUQT

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS9401BHSV(single-nucleus ATAC-seq (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_ATAC_RP029_G1_P077_L006_R1

md5sum

7990183d42c22ddb500f1f3b849c50fc

Content MD5sum

9f43277fd889d8ad105c6dffaa18aadc

File Size

2.1 GB

Submitted File Name

Multiome_ATAC_RP029_G1_L001_P077_S27_L006_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

22F3GTLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

71285957

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM5907AKIS

MultiplexedSample

posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 74 years) putamen tissue associated with Parkinson's disease; Homo sapiens (male, 89 years) posterior cingulate gyrus tissue; ... and 6 more samples