Home

IGVFFI5830MVUM

released
validated
File Set
IGVFDS3189UXGY(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 2573
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2573_R1
buenrostro-bernstein:SS-LS_2573_R1
md5sum
b8c2b4160bb0cf2a2d6ad33f67f97580
Content MD5sum
251acb267a6a8aa01925deaf388067e6
File Size
571 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-49_L4_SS-PKR-5_SS-V1-1st-THIRD_R1.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2573
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
21545842

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 5), male, Homo sapiens (26 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
GRCh38 fragments
Jason Buenrostro, Broad
13 GB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad