IGVFFI5824LBTU

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS5995PZJX(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 2

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X054_G4_P072_L002_R1

md5sum

aaff4f90894f23e24237441fcacc91a0

Content MD5sum

b4ff382f04bd414398e0b483d45a6b20

File Size

18 GB

Submitted File Name

Multiome_RNA_X054_G4_L004_P072_S16_L002_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19UBCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

151

Read Count

210112266

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM4944KVPX

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 86 years) putamen tissue associated with Parkinson's disease; Homo sapiens (female, 70 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 8 more samples