Home
Home
Search (⌘K or ⌃K)
Data
Resources / Standards
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI5768UMFB
IGVFFI5768UMFB
released
validated
Json view
File Set
IGVFDS4606LBDI
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 3884
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_3884_R1
md5sum
93fa2e89f2ef8f09c817eb5a8f6782fe
Content MD5sum
3175f8831043b43d07c9f55f4048bfe0
File Size
1.5 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-781_L4_SS-PKR-177_2022-APRIL-R1-PLATE2-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
3884
Flowcell ID
22523KLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
27883083
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3303ZLKL
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 177)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI1346ZRGU
yaml
seqspec
seqspec of IGVFFI5768UMFB, IGVFFI1751GOGK, IGVFFI3518DRNN
Jason Buenrostro, Broad
1.3 KB
validated