IGVFFI5760KHNI

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS4310WOQM(CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus)
Summary
I2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:240908-S029-PPIF_5SpliceSite-IndividualVariantExp-AGGT_CAAC-THP1-BioRep1-FFrep2-FACS_Input-PCRrep1_I2
md5sum
a2f94ed54e0bd0e8102cdeeae20e2188
Content MD5sum
696f3675b8e446ea28e64b035f304b95
File Size
14 MB
Submitted File Name
240908-S029-5splice-THP1-5splicesite_C11-Amp_PPIF_5splicesite-BioRep1-FFrep2-BinAll-PCRrep1_S972_I2_001.fastq.gz

Sequencing Details

Sequencing Platform
Sequencing Run
1
Illumina Read Type
I2
Index
AACAATGG:AGGTGCGT
Average Read Length
8
Read Count
1987027

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
THP-1 cell line, male, Homo sapiens modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transfected with a guide library

Attribution