IGVFFI5751XYDQ

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS0792CLDM(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X049_G2_P066_L007_I1

md5sum

1b3bbb88479fb7938ec9f5dc3f46fb09

Content MD5sum

37b5dea35a3d6bec93a5d14e2ffddf8d

File Size

433 MB

Submitted File Name

Multiome_RNA_X049_G2_L002_P066_S24_L007_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

2257GYLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

68489744

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM2711AYDL

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, Parkinson's disease

multiplexed sample: Homo sapiens (male, 63 years) cerebellar cortex tissue associated with Parkinson's disease; Homo sapiens (female, 86 years) substantia nigra tissue associated with Parkinson's disease; ... and 8 more samples