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INDEXED
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SequenceFile
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IGVFFI5749SZIW
IGVFFI5749SZIW
released
validated
Json view
File Set
IGVFDS3343IRTP
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8920
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8920_R1
md5sum
d99d43d747ecb6035a4120ea44630bc7
Content MD5sum
26c28cc9e261e8d1d2a16a26a87d1578
File Size
2.0 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2270_L6_SS-PKR-171_2022-APRIL-R1-PLATE2-2nd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8920
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
42090
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3115GZZM
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 171)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI1272FOKW
yaml
seqspec
seqspec of IGVFFI5749SZIW, IGVFFI3977QLNX, IGVFFI0549DSZA
Jason Buenrostro, Broad
1.3 KB
validated