Home

IGVFFI5745NDJC

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS7591HPZZ(single-nucleus ATAC-seq (10x multiome))
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_ATAC_RP003_G11_P051_L006_R1
md5sum
71d031231232d7256d0ebfd5e2bfb9d5
Content MD5sum
f6ef0820b978a8835601f008c71b9ee0
File Size
1.4 GB
Submitted File Name
Multiome_ATAC_RP003_G11_L011_P051_S39_L006_R1_001.fastq.gz
Checkfiles Version
v20
Attribution
Ryan Corces, Gladstone Institute UCSF

Sequencing Details

Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
223JL2LT3
Lane
6
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
50
Read Count
46798419

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male, 81 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 86 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples