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INDEXED
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SequenceFile
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IGVFFI5740DLEB
IGVFFI5740DLEB
released
validated
Json view
File Set
IGVFDS7929XOMS
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8984
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8984_R1
md5sum
43d1ecf3b25453af5eabbbfc88c27ba5
Content MD5sum
3dd29177555a7f8abb77c70f2f4a3af4
File Size
786 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2334_L6_SS-PKR-199_SS-V1-3rd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8984
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
17388159
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4768GZVP
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 199)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3574RECZ
yaml
seqspec
seqspec of IGVFFI5740DLEB, IGVFFI2380WKJD, IGVFFI2162JFNA
Jason Buenrostro, Broad
1.3 KB
validated