IGVFFI5723PIJL

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS6877VUOV(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP005_G2_P054_L006_I2

md5sum

83d7375c337ce19fdda1c68874ac9704

Content MD5sum

21543c95d3c76ef883e7fe2af126ffd8

File Size

344 MB

Submitted File Name

Multiome_RNA_RP005_G2_L002_P054_S37_L006_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JJGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

58792282

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7731BQTB

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 72 years) posterior cingulate gyrus tissue associated with Parkinson's disease; Homo sapiens (female, 81 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 10 more samples