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INDEXED
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SequenceFile
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IGVFFI5714GREQ
IGVFFI5714GREQ
released
validated
Json view
File Set
IGVFDS7635GZJI
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 9149
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_9149_R1
md5sum
27d50728aa5862eda1a37ee4b919949c
Content MD5sum
ed289ec6a741ee6ff29d262e27a2834b
File Size
625 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2307_L8_SS-PKR-182_SS-V1-3rd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
9149
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
13872873
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2051NVYB
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 182)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3310RMQA
yaml
seqspec
seqspec of IGVFFI5714GREQ, IGVFFI2810UAUI, IGVFFI3695XERX
Jason Buenrostro, Broad
1.3 KB
validated