Home

IGVFFI5706AEPS

released
validated
File Set
IGVFDS1085SCZI(single-nucleus ATAC-seq (10x multiome))
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
ansuman-satpathy:igvf_mouse_bridge_115_atac_r2
md5sum
4f22c68092e21e8412c97616b9e3ae49
Content MD5sum
86f8478d6f43b2d116cab1f8c2b8b703
File Size
5.7 GB
Submitted File Name
/oak/stanford/projects/igvf/Projects/230622_IGVF_Bridge_McGinnis/ATAC/ATAC_115_S6_L001_R2_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Flowcell ID
HV7LKDSX5
Lane
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
24
Read Count
324794308

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
left cerebral cortex tissue, male, Mus musculus C57BL/6J (10 weeks)

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI5706AEPS, IGVFFI1771YVVX, IGVFFI5559EVYB, IGVFFI1992CETB
Ansuman Satpathy, Stanford
1.4 KB
validated

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford