IGVFFI5703VXSA

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS5908UEFP(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X007_G6_P006_L002_I2

md5sum

1ec44037b53b7e4e6534d52e20c37b15

Content MD5sum

a9ed233989c5e4f1791ac224d7182e57

File Size

1.4 GB

Submitted File Name

Multiome_RNA_X007_G6_L006_P006_S16_L002_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H5THNDSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

213818488

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM9600LBOY

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 81 years) putamen tissue; Homo sapiens (male, 90 or above years) cerebellar cortex tissue; ... and 10 more samples