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INDEXED
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SequenceFile
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IGVFFI5699KRFZ
IGVFFI5699KRFZ
released
validated
Json view
File Set
IGVFDS4021UKPE
(single-nucleus ATAC-seq (10x multiome))
Summary
R3 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
ansuman-satpathy:igvf_mouse_bridge_769_atac_r3
md5sum
8c1665cd07dbaf9792dd6eeb6138bcce
Content MD5sum
d6981033a0768958212eeb85ba7fcf75
File Size
20 GB
Submitted File Name
/oak/stanford/groups/satpathy/users/backup/cmcg/bridge_new/IGVF_ATAC_769_B6J_10M_21_S2_L002_R3_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ansuman Satpathy, Stanford
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
22VLCLLT3
Lane
2
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R3
Average Read Length
50
Read Count
685553336
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9438GDDL
Tissue
left cerebral cortex
Mus musculus C57BL/6J (male, 10 weeks) left cerebral cortex tissue
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI6323NIKH
yaml
seqspec
seqspec of IGVFFI0360VNTD, IGVFFI2788FRNF, IGVFFI5699KRFZ, IGVFFI4843GIXM
Ansuman Satpathy, Stanford
1.4 KB
validated