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INDEXED
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SequenceFile
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IGVFFI5684RYGU
IGVFFI5684RYGU
released
validated
Json view
File Set
IGVFDS3355ZETN
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8966
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8966_R1
md5sum
e0044f77d94a0631d01e320aed0a06a2
Content MD5sum
6f18306933be61ce171c4de9de698352
File Size
800 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2316_L6_SS-PKR-183_2022-APRIL-R1-PLATE2-3rd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8966
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
17793608
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3928OWEM
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 183)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2924LOCM
yaml
seqspec
seqspec of IGVFFI5684RYGU, IGVFFI3107XLHC, IGVFFI7700OXSQ
Jason Buenrostro, Broad
1.3 KB
validated