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INDEXED
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SequenceFile
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IGVFFI5683TTVW
IGVFFI5683TTVW
released
validated
Json view
File Set
IGVFDS6909NSFT
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 7338
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_7338_R2
md5sum
0d241a5f9fff0dad9cb58c16ef344865
Content MD5sum
35483f8033c7e046768d681d86f2d1d3
File Size
11 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1910_L6_SS-PKR-433_2022-APRIL-R1-SET-OF-192_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
7338
Flowcell ID
22KFF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
199
Read Count
187407186
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9503WHHQ
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 433)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8153CPRN
yaml
seqspec
seqspec of IGVFFI4704XUQF, IGVFFI5683TTVW
Jason Buenrostro, Broad
1.3 KB
validated