IGVFFI5683NOQN

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS0631LOBZ(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X007_G7_P006_L002_R2

md5sum

79dd066f06ff83fee55180daa26f833b

Content MD5sum

8f9086db7a1a20f503efd8ef14ed0b61

File Size

16 GB

Submitted File Name

Multiome_RNA_X007_G7_L007_P006_S17_L002_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H5THNDSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

100

Read Count

298524361

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7838UKZT

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 81 years) putamen tissue; Homo sapiens (male, 90 or above years) cerebellar cortex tissue; ... and 10 more samples