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IGVFFI5680SGUB

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS9120JYMC(single-nucleus ATAC-seq (10x multiome))
Summary
R3 reads from sequencing run 219
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX15-SC3_snATAC_S1_R3
md5sum
68605f005209c8eb4709e0d06b96ee66
Content MD5sum
5a83d93cec632c259fa20346824c1dc8
File Size
12 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX15-SC3/AH7MYFDSX3_ICJY08/XHLT1-POOL-XX15-SC3-ATAC_S6_L002_R3_001.fastq.gz
Checkfiles Version
v17

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
219
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R3
Average Read Length
90
Read Count
243647966

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female, 34.0 years) peripheral blood mononuclear cell; Homo sapiens (male, 23.0 years) peripheral blood mononuclear cell; ... and 18 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Jimmie Ye, UCSF