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SequenceFile
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IGVFFI5678SLRI
IGVFFI5678SLRI
released
validated
Json view
File Set
IGVFDS1000OGYK
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 8301
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8301_R1
md5sum
bbbba6b41f8ad90ef8ed8e17b5116570
Content MD5sum
d7dfe2b300fe73ff22fe20572dc9781b
File Size
6.5 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2171_L6_SS-PKR-532_SS-V1-LEFT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8301
Flowcell ID
22TMH5LT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
148221559
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3867YBRY
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 532)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3237BMXT
yaml
seqspec
seqspec of IGVFFI5678SLRI, IGVFFI1685LSMG
Jason Buenrostro, Broad
1.3 KB
validated