IGVFFI5676PBJM

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS8045KMMQ(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP001_G5_P052_L004_R1

md5sum

db85fe3959d131627dc731e152282b60

Content MD5sum

a6cc8fc95ba59066137a943d8980f97d

File Size

744 MB

Submitted File Name

Multiome_RNA_RP001_G5_L005_P052_S5_L004_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JJGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

37235871

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7076WLCU

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 79 years) posterior cingulate gyrus tissue; Homo sapiens (male, 81 years) putamen tissue; ... and 10 more samples