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IGVFFI5671WTZX

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS8850GXZG(single-nucleus ATAC-seq (10x multiome))
Summary
R3 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_ATAC_X020_G4_P019_L003_R3
md5sum
ebed8e46b7f37ef662a610a046afa92a
Content MD5sum
744d0da022b0b62ef8fad35485109a44
File Size
6.3 GB
Submitted File Name
Multiome_ATAC_X020_G4_L004_P019_S36_L003_R3_001.fastq.gz
Checkfiles Version
v20
Attribution
Ryan Corces, Gladstone Institute UCSF

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Flowcell ID
HV7NNDSX5
Lane
3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R3
Average Read Length
50
Read Count
194924280

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male, 81 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 84 years) substantia nigra tissue associated with Parkinson's disease, mild cognitive impairment; ... and 10 more samples