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SequenceFile
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IGVFFI5665IECP
IGVFFI5665IECP
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS1166MLZP
(single-nucleus RNA sequencing assay (10x multiome))
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_RNA_X050_G8_P066_L006_R2
md5sum
5911161d7557217246f7474712a291f6
Content MD5sum
64f81abd6f761e783ee17b43e7d52e6a
File Size
3.0 GB
Submitted File Name
Multiome_RNA_X050_G8_L008_P066_S38_L006_R2_001.fastq.gz
Checkfiles Version
v20
Attribution
Ryan Corces, Gladstone Institute UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
2257GYLT3
Lane
6
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
90
Read Count
70385573
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM8228BJUZ
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 79 years) posterior cingulate gyrus tissue; Homo sapiens (male, 80 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; ... and 8 more samples