IGVFFI5661STML

{
    "@context": "/terms/",
    "@id": "/sequence-files/IGVFFI5661STML/",
    "@type": [
        "SequenceFile",
        "File",
        "Item"
    ],
    "accession": "IGVFFI5661STML",
    "aliases": [
        "jesse-engreitz:gRNAlibrary_file_CRUDO_MYC"
    ],
    "assay_titles": [],
    "audit": {},
    "award": {
        "@id": "/awards/HG011972/",
        "component": "functional characterization"
    },
    "content_md5sum": "ad0686c2b1ca3fa5428048b4cb4b71b6",
    "content_type": "reads",
    "controlled_access": false,
    "creation_timestamp": "2024-05-31T22:44:17.170818+00:00",
    "externally_hosted": false,
    "file_format": "fastq",
    "file_set": {
        "@id": "/construct-library-sets/IGVFDS7857SYCK/",
        "accession": "IGVFDS7857SYCK",
        "file_set_type": "guide library",
        "summary": "Guide (sgRNA) library targeting accessible genome regions in many genomic loci"
    },
    "file_size": 124951868,
    "gene_list_for": [],
    "href": "/sequence-files/IGVFFI5661STML/@@download/IGVFFI5661STML.fastq.gz",
    "input_file_for": [],
    "integrated_in": [],
    "lab": {
        "@id": "/labs/jesse-engreitz/",
        "title": "Jesse Engreitz, Stanford"
    },
    "loci_list_for": [],
    "maximum_read_length": 21,
    "md5sum": "c6e06d089e95499db38130bd15b92d9e",
    "mean_read_length": 21,
    "minimum_read_length": 21,
    "read_count": 5983219,
    "release_timestamp": "2024-07-10T19:46:20.616328+00:00",
    "s3_uri": "s3://igvf-files/2024/05/31/8fcea1a9-31cb-4553-a577-f9fe73ab43a0/IGVFFI5661STML.fastq.gz",
    "schema_version": "14",
    "seqspecs": [
        "/configuration-files/IGVFFI2661RXPN/"
    ],
    "sequencing_platform": {
        "@id": "/platform-terms/EFO_0008565/",
        "term_name": "Illumina HiSeq 2500"
    },
    "sequencing_run": 1,
    "status": "released",
    "submitted_by": {
        "@id": "/users/100f06c6-83a7-4b4d-9dfd-053a1829773b/",
        "title": "Benjamin Doughty"
    },
    "submitted_file_name": "/oak/stanford/groups/engreitz/Projects/Cohesin/210618_PoolQCCohesinCRISPRi/fastq-trimmed/C1.fastq.gz",
    "summary": "reads from sequencing run 1",
    "upload_status": "validated",
    "uuid": "8fcea1a9-31cb-4553-a577-f9fe73ab43a0"
}