IGVFFI5661EAZP

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS8759JYNP(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP013_G1_P062_L008_I1

md5sum

7157d642929d4ca8f78af3f352c4da7f

Content MD5sum

a50c21d41fac835c6030f513a0f57380

File Size

524 MB

Submitted File Name

Multiome_RNA_RP013_G1_L001_P062_S21_L008_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223H55LT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

77103892

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM3819ZCMN

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (female, 86 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 78 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 14 more samples