Home
Home
Search (⌘K or ⌃K)
Data
Resources / Standards
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI5658BUNI
IGVFFI5658BUNI
released
validated
Json view
File Set
IGVFDS9089INXN
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8634
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8634_R1
md5sum
371479d5534c8781e2be6c3b5cca229b
Content MD5sum
a67eea394c0c5607a3b0ad58d7214b40
File Size
217 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2272_L3_SS-PKR-173_2022-APRIL-R1-PLATE2-3rd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8634
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
4759658
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3431GUCA
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 173)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3406MTFU
yaml
seqspec
seqspec of IGVFFI5658BUNI, IGVFFI2330VGXC, IGVFFI5517FSEP
Jason Buenrostro, Broad
1.3 KB
validated