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INDEXED
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SequenceFile
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IGVFFI5655AMQC
IGVFFI5655AMQC
released
validated
Json view
File Set
IGVFDS5322OLLW
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 875
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_875_R1
md5sum
5b4366b1965e322090efa30a647dafa6
Content MD5sum
316e0d46623c94495f5c25030d204b4c
File Size
1.1 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-930_L5_SS-PKR-205_2022-APRIL-R1-PLATE2-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
875
Flowcell ID
22773CLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
18409246
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0356QINW
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 205)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8279JMCH
yaml
seqspec
seqspec of IGVFFI5655AMQC, IGVFFI3154HHKA, IGVFFI5398VXDK
Jason Buenrostro, Broad
1.4 KB
validated