IGVFFI5647VBIV

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS0646UHCO(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP020_G4_P066_L008_R1

md5sum

b6f92a29cefd3e0b0e5fbd70e92d0cef

Content MD5sum

f776448613d0b29dd8be116404de6f29

File Size

1.2 GB

Submitted File Name

Multiome_RNA_RP020_G4_L004_P066_S22_L008_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

2257GYLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

62962423

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM2478QXUD

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 82 years) substantia nigra tissue associated with cerebral amyloid angiopathy; Homo sapiens (male, 84 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples