IGVFFI5642JONY

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS2136ZXKP(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X007_G3_P006_L002_R1

md5sum

c2000a14768379b4ab4f3a2517206339

Content MD5sum

1dd524badbbc639c0f9d45a2a6c836b0

File Size

6.6 GB

Submitted File Name

Multiome_RNA_X007_G3_L003_P006_S13_L002_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H5THNDSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

300464647

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM5871OTYA

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 81 years) putamen tissue; Homo sapiens (male, 90 or above years) cerebellar cortex tissue; ... and 10 more samples