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INDEXED
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SequenceFile
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IGVFFI5620JKGH
IGVFFI5620JKGH
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS0002AETO
(single-nucleus RNA sequencing assay (10x multiome))
Summary
I1 reads from sequencing run 257
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX16-SC4_snRNA_S0_I1
md5sum
c08d27fc020b7be0a97636e35fd0d046
Content MD5sum
cb52bc284280302f22ee87cccbfe0c6c
File Size
1.9 GB
Submitted File Name
production_data/xhlt1/data/single_cell_GEX/raw/XHLT1-POOL-XX16-SC4/BH73JJDSX3_ICJY07/XHLT1-POOL-XX16-SC4-GEX_S11_L001_I1_001.fastq.gz
Checkfiles Version
v17
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
257
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
I1
Average Read Length
10
Read Count
294395365
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM7234OUBC
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 24.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 24.0 years) peripheral blood mononuclear cell; ... and 18 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Jimmie Ye, UCSF