{
"@context": "/terms/",
"@id": "/sequence-files/IGVFFI5616SZRW/",
"@type": [
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"File",
"Item"
],
"accession": "IGVFFI5616SZRW",
"aliases": [
"ansuman-satpathy:igvf_exp18_rna_10x1_NGS1_i1"
],
"assay_titles": [
"10x multiome with MULTI-seq"
],
"audit": {},
"award": {
"@id": "/awards/HG012076/",
"component": "mapping"
},
"checkfiles_version": "v14",
"content_md5sum": "9cfc6e8406c39b98583c7346bc899d99",
"content_type": "reads",
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"creation_timestamp": "2025-01-27T22:57:52.935645+00:00",
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"file_format": "fastq",
"file_set": {
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"accession": "IGVFDS1210CYWP",
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{
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"accession": "IGVFSM4392KEFB",
"classifications": [
"cell line",
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"multiplexed sample"
],
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"modifications": [],
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{
"@id": "/sample-terms/EFO_0001196/",
"status": "released",
"term_name": "IMR-90"
},
{
"@id": "/sample-terms/EFO_0001203/",
"status": "released",
"term_name": "MCF-7"
},
{
"@id": "/sample-terms/EFO_0002824/",
"status": "released",
"term_name": "HCT116"
},
{
"@id": "/sample-terms/EFO_0003072/",
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"term_name": "SK-N-SH"
},
{
"@id": "/sample-terms/EFO_0022838/",
"status": "released",
"term_name": "HUDEP-2"
},
{
"@id": "/sample-terms/NTR_0000753/",
"status": "released",
"term_name": "TeloHAEC"
}
],
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"taxa": "Homo sapiens",
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"purpose": "perturbation",
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}
]
}
],
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"illumina_read_type": "I1",
"input_file_for": [
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],
"integrated_in": [],
"lab": {
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"title": "Ansuman Satpathy, Stanford"
},
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"release_timestamp": "2025-03-07T01:18:14.523626+00:00",
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"schema_version": "15",
"seqspecs": [
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],
"sequencing_kit": "NovaSeq X Series 25B Reagent Kit",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"sequencing_run": 1,
"status": "released",
"submitted_by": {
"@id": "/users/353655bc-31a1-4cd9-bac3-c7d34faf722f/",
"title": "Christopher Mcginnis"
},
"submitted_file_name": "/oak/stanford/groups/satpathy/users/backup/cmcg/igvf18/GEX/GEX1-CMAS23R_S25_L005_I1_001.fastq.gz",
"summary": "I1 reads from sequencing run 1",
"upload_status": "validated",
"uuid": "ec46d6c0-ba95-445d-b26a-8469fd00a464"
}