IGVFFI5589AAFO

{
    "@context": "/terms/",
    "@id": "/sequence-files/IGVFFI5589AAFO/",
    "@type": [
        "SequenceFile",
        "File",
        "Item"
    ],
    "accession": "IGVFFI5589AAFO",
    "aliases": [
        "jesse-engreitz:220829_8merInsertion-Jurkat_NoStimulation-Amp_PPIF_promoter-BioRep2-FFrep2-BinA-PCRrep1_I1"
    ],
    "audit": {
        "INTERNAL_ACTION": [
            {
                "category": "mismatched status",
                "detail": "Released sequence file [IGVFFI5589AAFO](/sequence-files/IGVFFI5589AAFO/) has in progress subobject auxiliary set [IGVFDS4326ZDKQ](/auxiliary-sets/IGVFDS4326ZDKQ/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/sequence-files/IGVFFI5589AAFO/"
            }
        ]
    },
    "award": {
        "@id": "/awards/HG011972/",
        "component": "functional characterization"
    },
    "content_md5sum": "9ea46dd5a7bdf6959df46a81de72c13d",
    "content_type": "reads",
    "controlled_access": false,
    "creation_timestamp": "2023-12-05T19:08:41.366664+00:00",
    "file_format": "fastq",
    "file_set": "/auxiliary-sets/IGVFDS4326ZDKQ/",
    "file_size": 3183553,
    "gene_list_for": [],
    "href": "/sequence-files/IGVFFI5589AAFO/@@download/IGVFFI5589AAFO.fastq.gz",
    "illumina_read_type": "I1",
    "index": "ATTCCTCT:CAGT",
    "input_file_for": [],
    "integrated_in": [],
    "lab": {
        "@id": "/labs/jesse-engreitz/",
        "title": "Jesse Engreitz, Stanford"
    },
    "loci_list_for": [],
    "maximum_read_length": 8,
    "md5sum": "0b2a50f020088d4a1280aa64c5a647f0",
    "mean_read_length": 8,
    "minimum_read_length": 8,
    "read_count": 383003,
    "release_timestamp": "2023-12-20T23:34:38.884484+00:00",
    "s3_uri": "s3://igvf-files/2023/12/05/dd1e457a-3c09-49b5-b51a-2dcb9dc05809/IGVFFI5589AAFO.fastq.gz",
    "schema_version": "14",
    "seqspecs": [],
    "sequencing_platform": "/platform-terms/EFO_0008566/",
    "sequencing_run": 1,
    "status": "released",
    "submitted_by": {
        "@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
        "title": "Michael Montgomery"
    },
    "submitted_file_name": "220829_pPPIF_JurkatVFF-Jurkat-PE2A-BFP-pPPIF-Amp_pPPIF_S6-BioRep2-FFRep2-BinA-PCRrep1_S22_I1_001.fastq.gz",
    "summary": "I1 reads from sequencing run 1",
    "upload_status": "validated",
    "uuid": "dd1e457a-3c09-49b5-b51a-2dcb9dc05809"
}