IGVFFI5581RKRW

released
validated
File Set
IGVFDS2133JAFB(scCRISPR activation screen integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci)
Summary
I2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jay-shendure:CRISPRa_singlecell_iPSCneuron_VPH_sequence_exprs_10Xlane4_seqlane1_I2
md5sum
7d017ab3b8472f9f7afa4476fbf195bf
Content MD5sum
e4bc27fc1a8725413bde6baede18a67b
File Size
907 MB
Submitted File Name
/net/shendure/vol10/www/content/members/CRISPRa_QTL_website/public/data/neuron_data/sequencing_data/cellranger_mkfastq_output/outs/fastq_path/AAAMCTVHV/exprs_4/exprs_4_S4_L001_I2_001.fastq.gz

Sequencing Details

Sequencing Platform
Sequencing Run
1
Flowcell ID
AAAMCTVHV
Lane
1
Sequencing Kit
NextSeq 1000/2000 P3 Reagent Kit
Illumina Read Type
I2
Average Read Length
10
Read Count
161078391

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
GM25256 (WTC-11) differentiated cell specimen induced to neuron for 19 days (cellular sub pool: 10Xlane4), male, Homo sapiens modified with CRISPRa Sp-dCas9-VPH, transfected with a guide library

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Jay Shendure, UW
442 MB
validated

Attribution