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IGVFFI5569EZWD

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS0624REZE(single-nucleus ATAC-seq (10x multiome))
Summary
R3 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_ATAC_X043_G8_P043_L006_R3
md5sum
5e1e324a61b77892088ea8ab1daee524
Content MD5sum
5339e647e87def2b7034c6e8ee429dc0
File Size
1.6 GB
Submitted File Name
Multiome_ATAC_X043_G8_L008_P043_S34_L006_R3_001.fastq.gz
Checkfiles Version
v20

Sequencing Details

Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
223JJTLT3
Lane
6
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R3
Average Read Length
51
Read Count
50591554

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female, 79 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (male, 79 years) cerebellar cortex tissue associated with Alzheimer disease, Parkinson's disease; ... and 10 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Ryan Corces, Gladstone Institute UCSF