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INDEXED
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SequenceFile
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IGVFFI5551YAIF
IGVFFI5551YAIF
released
validated
Json view
File Set
IGVFDS0228CLFT
(reporter library targeting random selections genome-wide)
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
tim-reddy:starr-seq-dna-fastq-k562-P012-R2
md5sum
fa5fa9d8abae20ea3b1a02cd2edf9ad4
Content MD5sum
0a37dfa65d7f15b05e397487cf02baa9
File Size
7.8 GB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/raw_data/AIM_1_STARR_seq/K562.starrseq.dna.pool12.R2.fastq.gz
Checkfiles Version
v17
Attribution
Tim Reddy, Duke
(
HG012053
—
Charles Gersbach
)
Sequencing Details
Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AACNYKFM5
Lane
1
Sequencing Kit
NextSeq 2000 P3 XLEAP-SBS Reagent Kit
Illumina Read Type
R2
Average Read Length
301
Read Count
49576560
Files Derived From This File
2 items
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2691XADJ
bam
alignments
GRCh38 unfiltered alignments
Tim Reddy, Duke
7.5 GB
validated
IGVFFI8858NPQE
bam
alignments
custom assembly unfiltered alignments
Tim Reddy, Duke
7.8 GB
validated