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INDEXED
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SequenceFile
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IGVFFI5547ZSKU
IGVFFI5547ZSKU
released
validated
Json view
File Set
IGVFDS7400VLBE
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4382
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4382_R1
md5sum
5692dee0a2283366f88d5d1afbdef506
Content MD5sum
d0363fcebe422dabca2c4967a452c048
File Size
3.3 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-547_L2_SS-PKR-176_SS-V1-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4382
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
54524978
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2983PFUY
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled cell specimen (cellular sub pool: SS-PKR 176)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3144JRDQ
yaml
seqspec
seqspec of IGVFFI5547ZSKU, IGVFFI1143DMLU, IGVFFI9231SYDP
Jason Buenrostro, Broad
1.3 KB
validated