{
"@context": "/terms/",
"@id": "/sequence-files/IGVFFI5541ETUF/",
"@type": [
"SequenceFile",
"File",
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],
"accession": "IGVFFI5541ETUF",
"aliases": [
"jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep3-FACS_Input-PCRrep1_I2"
],
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Released sequence file [IGVFFI5541ETUF](/sequence-files/IGVFFI5541ETUF/) has in progress subobject auxiliary set [IGVFDS1697BVWV](/auxiliary-sets/IGVFDS1697BVWV/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/sequence-files/IGVFFI5541ETUF/"
}
]
},
"award": {
"@id": "/awards/HG011972/",
"component": "functional characterization"
},
"content_md5sum": "75ccf09eec5c9dc62325cd1053e7f6b8",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-12-05T20:36:53.502333+00:00",
"file_format": "fastq",
"file_set": "/auxiliary-sets/IGVFDS1697BVWV/",
"file_size": 1403576,
"gene_list_for": [],
"href": "/sequence-files/IGVFFI5541ETUF/@@download/IGVFFI5541ETUF.fastq.gz",
"illumina_read_type": "I2",
"index": "GCACACGA:TTGT",
"input_file_for": [],
"integrated_in": [],
"lab": {
"@id": "/labs/jesse-engreitz/",
"title": "Jesse Engreitz, Stanford"
},
"loci_list_for": [],
"maximum_read_length": 4,
"md5sum": "79acab78d5b4331c8ad473621b98f0ad",
"mean_read_length": 4,
"minimum_read_length": 4,
"read_count": 165229,
"release_timestamp": "2023-12-20T23:43:33.149273+00:00",
"s3_uri": "s3://igvf-files/2023/12/05/c9a029dc-e46f-49fc-a540-4402ba7ffc51/IGVFFI5541ETUF.fastq.gz",
"schema_version": "14",
"seqspecs": [],
"sequencing_platform": "/platform-terms/EFO_0008566/",
"sequencing_run": 1,
"status": "released",
"submitted_by": {
"@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
"title": "Michael Montgomery"
},
"submitted_file_name": "230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep3-BinAll-PCRrep1_S387_I2_001.fastq.gz",
"summary": "I2 reads from sequencing run 1",
"upload_status": "validated",
"uuid": "c9a029dc-e46f-49fc-a540-4402ba7ffc51"
}