IGVFFI5541ETUF

released
validated
{
    "@context": "/terms/",
    "@id": "/sequence-files/IGVFFI5541ETUF/",
    "@type": [
        "SequenceFile",
        "File",
        "Item"
    ],
    "accession": "IGVFFI5541ETUF",
    "aliases": [
        "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep3-FACS_Input-PCRrep1_I2"
    ],
    "audit": {
        "INTERNAL_ACTION": [
            {
                "category": "mismatched status",
                "detail": "Released sequence file [IGVFFI5541ETUF](/sequence-files/IGVFFI5541ETUF/) has in progress subobject auxiliary set [IGVFDS1697BVWV](/auxiliary-sets/IGVFDS1697BVWV/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/sequence-files/IGVFFI5541ETUF/"
            }
        ]
    },
    "award": {
        "@id": "/awards/HG011972/",
        "component": "functional characterization"
    },
    "content_md5sum": "75ccf09eec5c9dc62325cd1053e7f6b8",
    "content_type": "reads",
    "controlled_access": false,
    "creation_timestamp": "2023-12-05T20:36:53.502333+00:00",
    "file_format": "fastq",
    "file_set": "/auxiliary-sets/IGVFDS1697BVWV/",
    "file_size": 1403576,
    "gene_list_for": [],
    "href": "/sequence-files/IGVFFI5541ETUF/@@download/IGVFFI5541ETUF.fastq.gz",
    "illumina_read_type": "I2",
    "index": "GCACACGA:TTGT",
    "input_file_for": [],
    "integrated_in": [],
    "lab": {
        "@id": "/labs/jesse-engreitz/",
        "title": "Jesse Engreitz, Stanford"
    },
    "loci_list_for": [],
    "maximum_read_length": 4,
    "md5sum": "79acab78d5b4331c8ad473621b98f0ad",
    "mean_read_length": 4,
    "minimum_read_length": 4,
    "read_count": 165229,
    "release_timestamp": "2023-12-20T23:43:33.149273+00:00",
    "s3_uri": "s3://igvf-files/2023/12/05/c9a029dc-e46f-49fc-a540-4402ba7ffc51/IGVFFI5541ETUF.fastq.gz",
    "schema_version": "14",
    "seqspecs": [],
    "sequencing_platform": "/platform-terms/EFO_0008566/",
    "sequencing_run": 1,
    "status": "released",
    "submitted_by": {
        "@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
        "title": "Michael Montgomery"
    },
    "submitted_file_name": "230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep3-BinAll-PCRrep1_S387_I2_001.fastq.gz",
    "summary": "I2 reads from sequencing run 1",
    "upload_status": "validated",
    "uuid": "c9a029dc-e46f-49fc-a540-4402ba7ffc51"
}