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INDEXED
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SequenceFile
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IGVFFI5512IJAU
IGVFFI5512IJAU
released
validated
Json view
File Set
IGVFDS9080FVAM
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 3942
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_3942_R1
md5sum
50020a0a538af95df4a0b0b9f3a6ad61
Content MD5sum
4a5fffa33a07c06053b3f83eaf13a0fd
File Size
642 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-694_L6_SS-PKR-180_SS-V1-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
3942
Flowcell ID
22523KLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
11644909
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6804CCZD
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 180)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI9016TKVX
yaml
seqspec
seqspec of IGVFFI5512IJAU, IGVFFI1905BTBX, IGVFFI3674OQAE
Jason Buenrostro, Broad
1.4 KB
validated