Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI5511LYXX
IGVFFI5511LYXX
preview
validated
Json view
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS5462PWXH
(single-nucleus ATAC-seq (10x multiome))
Summary
R3 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_ATAC_X004_G2_P003_L004_R3
md5sum
c3bf5b0d28dc9cb4c846c84d68057f54
Content MD5sum
cd079c6b40e939fac1ce3f915309530d
File Size
7.0 GB
Submitted File Name
Multiome_ATAC_nd_20-57_CING_X004_S02_L002_B1_T1_P003_S16_L004_R3_001.fastq.gz
Checkfiles Version
v20
Attribution
Ryan Corces, Gladstone Institute UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Flowcell ID
H5TH7DSX5
Lane
4
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R3
Average Read Length
50
Read Count
212901230
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6036OELU
Tissue
posterior cingulate gyrus
Homo sapiens (male, 81 years) posterior cingulate gyrus tissue