Home
Home
Search (⌘K or ⌃K)
Data
Resources / Standards
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI5451AZAC
IGVFFI5451AZAC
preview
validated
Json view
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS9782RBTD
(single-nucleus RNA sequencing assay (10x multiome))
Summary
R1 reads from sequencing run 251
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX16-SC3_snRNA_S1_R1
md5sum
ca0d3f61f8be1a054427d559a986ae1f
Content MD5sum
dd1f1f97abee41116b9cbf8f301fe5d4
File Size
7.2 GB
Submitted File Name
production_data/xhlt1/data/single_cell_GEX/raw/XHLT1-POOL-XX16-SC3/BH73JJDSX3_ICJY07/XHLT1-POOL-XX16-SC3-GEX_S10_L002_R1_001.fastq.gz
Checkfiles Version
v17
Attribution
Jimmie Ye, UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
251
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
246722092
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM7058GGSU
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 33.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 24.0 years) peripheral blood mononuclear cell; ... and 18 more samples