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INDEXED
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SequenceFile
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IGVFFI5401KJCX
IGVFFI5401KJCX
released
validated
Json view
File Set
IGVFDS3977WBMS
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 5375
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_5375_R1
md5sum
89d0b7799fcd64dfa275b3683cb0d4c6
Content MD5sum
6a2057f479031d277a7a6de60e0d6549
File Size
9.0 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1589_L4_SS-PKR-433_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5375
Flowcell ID
22KHF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
198211149
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9503WHHQ
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 433)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2212QVWV
yaml
seqspec
seqspec of IGVFFI5401KJCX, IGVFFI0200LBQH
Jason Buenrostro, Broad
1.3 KB
validated