IGVFFI5378KRDR

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS0551JWHB(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X042_G7_P044_L008_R2

md5sum

6d004a8ce3881d955a09621d402de69b

Content MD5sum

c013919e47364658a885861d1d11fd4e

File Size

3.0 GB

Submitted File Name

Multiome_RNA_X042_G7_L007_P044_S25_L008_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

222YMLLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

71219081

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM2480DKQY

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (female, 79 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 82 years) putamen tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy, multiple sclerosis; ... and 10 more samples