IGVFFI5363XAXN

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS9599ZHWG(single-nucleus ATAC-seq (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_ATAC_RP014_G1_P061_L002_R2

md5sum

a5b3795d0a459ccceeebe8c59cf2d438

Content MD5sum

cf43240bd6036d3e3344931394eafee5

File Size

140 MB

Submitted File Name

Multiome_ATAC_RP014_G1_L001_P061_S9_L002_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

2257VGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

7515430

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM3192MEUT

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 78 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 14 more samples