IGVFFI5362UKPD

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS4002VSZF(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP019_G1_P064_L004_I2

md5sum

8a2fdfb7711e7dd839aa4c1a3e28b07a

Content MD5sum

be01ee082a5e1dffd9d1192978c7142e

File Size

392 MB

Submitted File Name

Multiome_RNA_RP019_G1_L001_P064_S15_L004_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223H55LT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

66051893

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM4069BQTG

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, Parkinson's disease

multiplexed sample: Homo sapiens (male, 83 years) posterior cingulate gyrus tissue associated with Parkinson's disease; Homo sapiens (male, 72 years) middle temporal gyrus tissue associated with cerebral amyloid angiopathy; ... and 10 more samples